Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015843463.1_cds_XP_016508746.1_21739
CDS Infomation

[gene=LOC107826297] [db_xref=GeneID:107826297] [protein=pentatricopeptide repeat-containing protein At4g14050, mitochondrial-like] [protein_id=XP_016508746.1] [location=complement(2321..4153)] [gbkey=CDS]
Sequence

ATGCATCACCCTCAACTTCTTCACCAACTTCAAAGATGCGCCAGATTCCATTTCCCTGCC
GATGGCAGAAAATTACATGCTCACATAGTCAAGATTGGCTTAGACAATTGCTCGCTAAAG
CTTTGCAACAATCTCATAGATATGTATGGCAAATGTGGCCTCCTAGATAACGCAGTCCAA
CTGTTCGATGAAATGCCTCAAAGAGATTTAGCTTCATGGGCCTCAATTTTTACTGCACAC
AACGAAGCCAACCAACACCAAAAGACCCTTTCCCTCTTTCCCAACATGTTTTTGGATGGT
CTTTGGCCTGACCATTTTGTTTTTGCTAGCATTGTTAAGGCTTGTGCTAACTTAGGGACT
TTGAAAGTTGGCAAACAAGTGCATGCTCAGTTCTTGAAATCAGAATTTTCTCATGATGAT
GTTGTTAAGTCTTCTATGGTTGATATGTATGCAAAATGTGGATTGCCTGATAATGCAAAA
ACTGTTTTTGACGCGATCTTGGTTAAGAATATGATTTGTTCATCTGCAATGATATCGGGG
TATGCACGTGTTGGGAGGAAAGATGAAGCTTTTGAGCTACTAGGAAAGTTGCCAGTGAAG
AATTTGCAATGTTGGACTGCTTTGATATCTGGGTTTGTGCAAAATGGGAACTTGATTGAT
GCCATTGATGTTTTTCTTGAAGTAAGAAGAGAAGGTGTCGATATGAAGGACCCCTTTATT
CTTTCGAGCATAATAGGAGCTTGTGCTAACTTAGCAGCCCTGCAGCTCGGGAAACAGATT
CATCGATTAGTTTTAGGACTTGGTTATGAACTTAGTTTGTTTGTTAGCAATGCCCTTGTG
GATATGTATGCAAAGTGTAGCGATATTGTGGAAGCAAAGAGGATGTTTGATAGTATGTTG
ACAAGAGATGTTGTATCTTGGACCTCAATTATTGTCGGGATGGCACAGCACGGGCAAGCT
ATTGAGGCGTTATCTTTATACGATGAGATGATCTTGGCTGGCGTTAAGCCAAATGAAGTA
ACTTTTGTTGGATTAATCTATGCTTGTAGTCATGTTGGATTGGTCAGTAAAGGTCAGAGT
CTATTTAAATCCATGATTGAAGATTATAAATTAAGTCCTTCTTTGCAGCATTATACATGC
TTATTAGATCTGTTTAGTCGATCTGGTCACCTCGAGGATGCTGAGAACCTTCTTAACACA
ATGCCATTTCAGCCTGATGAAGCTGCTTGGGCTGCTTTATTGAGTGCTTGTAAGCAACAC
GGAAATACTGAAATGGGAGTTAGGGTCGCCAATCGCTTACTAATTCTCGGACCAAAAGAT
CCTTCAACTTGTATACTGCTGTCAAATACTTATGCTGGTGCAGCTTTGTGGGACAATGTA
TCTAAGTTGAGGAAGCTGCTGGCAAATTTGGAAATTAGGAAAGAACCTGGCTACAGTTCT
ATTGATTTGGGAAAAGAAACTACGACATTTTATGCTGGAGAGGCATTGTATCATATGAAG
GATGAGATATTTGCACTGCTAAAGGAATTTGATTCCGAGATGAGGAAGAGAGGTTATATT
CCCGATACCACGTTTGTTTTGCATGATATGGAGCAGCAGGAGAAGGAAAGGCAGCTTTTT
TGGCATAGTGAGAGATTGGCTGTGGCTTATGGACTTCTGAGAACTGTTCCTGGATCAGTA
ATAAGGGTGGTGAAAAACCTTCGGATTTGTGGTGATTGCCACACAGTTATTAAATTTATA
TCAAGCATTACAGGTCGTAAAATTATCGTTAGAGATGCTAATAGATTCCATCACTTTGAT
AAGGGGATATGTTCATGTAATGACTTTTGGTGA

Peptide Sequence

PEP ID

XP_016508746.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At4g14050, mitochondrial-like [Nicotiana tabacum]
Sequence

MHHPQLLHQLQRCARFHFPADGRKLHAHIVKIGLDNCSLKLCNNLIDMYGKCGLLDNAVQ
LFDEMPQRDLASWASIFTAHNEANQHQKTLSLFPNMFLDGLWPDHFVFASIVKACANLGT
LKVGKQVHAQFLKSEFSHDDVVKSSMVDMYAKCGLPDNAKTVFDAILVKNMICSSAMISG
YARVGRKDEAFELLGKLPVKNLQCWTALISGFVQNGNLIDAIDVFLEVRREGVDMKDPFI
LSSIIGACANLAALQLGKQIHRLVLGLGYELSLFVSNALVDMYAKCSDIVEAKRMFDSML
TRDVVSWTSIIVGMAQHGQAIEALSLYDEMILAGVKPNEVTFVGLIYACSHVGLVSKGQS
LFKSMIEDYKLSPSLQHYTCLLDLFSRSGHLEDAENLLNTMPFQPDEAAWAALLSACKQH
GNTEMGVRVANRLLILGPKDPSTCILLSNTYAGAALWDNVSKLRKLLANLEIRKEPGYSS
IDLGKETTTFYAGEALYHMKDEIFALLKEFDSEMRKRGYIPDTTFVLHDMEQQEKERQLF
WHSERLAVAYGLLRTVPGSVIRVVKNLRICGDCHTVIKFISSITGRKIIVRDANRFHHFD
KGICSCNDFW

Transcript Sequence

Gene sequence data has not been registered.